MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4060_ses-1_T1w.
  • Date and time: 2022-11-02, 18:16.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.39705573925677734
cnr3.2822440081403124
efc0.5452546542922648
fber1817.0327111111112
fwhmavg4.259876666666666
fwhmx4.12315
fwhmy4.91458
fwhmz3.7419
icvscsf0.1796112389974124
icvsgm0.41267470501194875
icvswm0.4077140559906388
inumed1.6163873672485352
inurange0.4819496214389798
qi11.197247926100537e-05
qi20.004703781694726547
rpvecsf27.6647525914903
rpvegm12.892613241445309
rpvewm15.791238744421328
sizex176
sizey256
sizez256
snrcsf1.8448147093032061
snrgm11.442367729927355
snrtotal13.89947063778442
snrwm28.4112294741227
snrdcsf46.22326361298876
snrdgm80.84129022326991
snrdtotal78.11634646478511
snrdwm107.28448555809668
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk20.42427512926353
summarybgmad6.1065340854209005
summarybgmean13.601426478379338
summarybgmedian12.193799950182438
summarybgn2784069.0
summarybgp054.064599983394146
summarybgp9526.772165223956108
summarybgstdv7.982845930175035
summarycsfk28.24654093109598
summarycsfmad124.05906089328776
summarycsfmean457.59373848002406
summarycsfmedian430.8475982397795
summarycsfn27417.0
summarycsfp05248.15737765282393
summarycsfp95643.2690128386016
summarycsfstdv233.5409289008672
summarygmk-0.09413316327002219
summarygmmad65.9666379490863
summarygmmean757.6984121886744
summarygmmedian753.5226422548294
summarygmn27715.0
summarygmp05656.2432159855962
summarygmp95874.7181748263538
summarygmstdv65.85254606274498
summarywmk0.9454836831679687
summarywmmad31.898605683053912
summarywmmean997.3269073585315
summarywmmedian999.9999852478504
summarywmn255205.0
summarywmp05934.4244388490915
summarywmp951049.5339103788137
summarywmstdv35.19728095355773
tpmoverlapcsf0.1481144279241562
tpmoverlapgm0.44524580240249634
tpmoverlapwm0.5083878636360168
wm2max0.5746556371733673
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime14:03:53.937500
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.0215356, 0.988835, 0.147447, 0.0184208, 0.147064, -0.988955]
ImageOrientationTextSag>Cor(1.4)>Tra(-0.9)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0303269
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber19
ShimSetting[2635, 5507, -7421, 256, -82, -967, 133, -220]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp253.487
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum7412bfdcd2637fd292611b92baad34ea
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.